PredAmyl-MLP: Prediction of Amyloid Proteins Using Multilayer Perceptron

Table 2

Comparison of different feature representation methods.

Method	ACC (%)	SE	SP	MCC
SVMProt-188D+TPC	91.59	0.836	0.950	0.798
PseAAC+473D	64.71	0.339	0.780	0.126
PseAAC+CTriad	72.76	0.491	0.830	0.333
CTriad+473D	70.56	0.036	0.995	0.119
473D+PseAAC+CTriad	67.45	0.230	0.866	0.120
SVMProt-188D	80.80	0.606	0.895	0.527
TPC	90.12	0.776	0.955	0.760
-skip-2-gram	71.11	0.291	0.893	0.228
PseAAC	78.42	0.570	0.877	0.469
CTriad	72.57	0.345	0.890	0.281
DPC	68.37	0.345	0.830	0.193
473D	76.96	0.339	0.955	0.398