Pangenome Analysis of Helicobacter pylori Isolates from Selected Areas of Africa Indicated Diverse Antibiotic Resistance and Virulence Genes

Table 1

Averages of genomic features of H. pylori and their implications.

Genome feature	Average	Implication	References
Contigs	61.5	Good number of overlapping clones	[28]
G-size	1627587.8	More genes, more and longer introns, and more transposable elements	[29]
GC content	38.9	Unstable genome with low melting point	[30]
Contig L50	8.1	Total number of chromosomes, organelle genomes, and plasmids in the assembly	[31]
Contig N50	80187.7	Assess the contiguity of an assembly	[32]
tRNA	35.5	Normal	[33]
rRNA	2.4	Overloaded the column	[34]
CDS	1660.1	Corresponds to amino acids in a protein	[35]
Coarse consist	99.8	The genome qualities are good	[36]
Fine consist	99.0	The genome qualities are good	[36]
CheckM contamination	2.3	The genome qualities are good	[37]
CheckM completeness	99.9	The genome qualities are good	[37]