Research Article

Combined 3D QSAR Based Virtual Screening and Molecular Docking Study of Some Selected PDK-1 Kinase Inhibitors

Table 5

The estimated activity, interaction energy, and LigandFit scoring results of top ranked four compounds obtained from the combination of Hypo1 based virtual screening and molecular docking studies.

Name Est. (nM) Interaction energy
(kcal/mol)
LigScore1 LigScore2 -PLP1 -PLP2 -PMF

Compound_1 3.00 64.40 4.23 4.98 73.60 68.90 103.10
NSC_218342 31.40 65.39 4.93 4.25 61.42 59.79 83.91
NSC_24871 74.10 51.18 5.03 5.77 65.14 67.09 95.66
NSC_211930 82.00 57.30 6.17 6.23 79.00 71.43 75.76
NSC_84044 87.70 51.11 4.23 5.31 65.40 55.20 92.87
NSC_325657 93.80 55.47 5.84 6.16 75.72 73.50 106.54
NSC_343659 94.50 59.16 4.41 4.47 51.82 53.26 82.51
SB_01794 160.00 46.36 3.67 4.04 53.22 56.12 107.10