Journal of Tropical Medicine

Research Article

Genome-Wide Prediction of Vaccine Candidates for Leishmania major: An Integrated Approach

Table 3

(a) NetCTL predicted top scoring CTL epitopes along with start position and processing score for the HLA-B supertypes (B7, B8, B27, and B39) in 25 L. major candidate antigens. (b) NetCTL predicted top scoring CTL epitopes along with start position and processing score for the HLA-B supertypes (B44, B58, and B62) in 25 L. major candidate antigens.
(a)
AntigensB7B8B27B39
1APALYTISL
(508: 1.7598)		PLRWRFRAV
(957: 2.1122)		RRAKRGIQK
(908: 1.8727)		YQLTGTPVL
(439: 2.2884)
2TPSSARLSM
(83: 1.7256)		FPISKGAAL
(203: 2.2300)		VRVDTQSSF
(195: 1.4558)		SFDDYTMVL
(42: 2.2280)
3APNYYLTPL
(312: 1.7308)		YSLWVAAAV
(486: 1.0021)		SRAILIAVL
(3: 1.3691)		SRAILIAVL
(3: 1.8971)
4APNYYLTPL
(517: 1.7308)		FVRVWDRSL
(215: 1.8335)		LRVSHSSVK
(224: 1.3540)		VRAPFTIQL
(155: 1.5796)
5APAHGSVSL
(33: 1.7709)		VKHLLMAAM
(3: 1.4045)		DRLGQCMVV
(109: 0.5955)		KHLLMAAML
(4: 1.0764)
6SPTPLLAAL
(256: 1.6602)		NPHKRGAAA
(9: 1.8533)		KRGAAAVLL
(12: 1.3311)		HKRGAAAVL
(11: 1.2133)
7APSPCVPPL
(175: 1.5944)		AAYRSYAAV
(144: 0.9391)		MQVLLGADF
(237: 0.8288)		SHDGKHVIL
(31: 2.6870)
8LPRLFLAFL
(5: 1.6144)		LLPRLFLAF
(4: 1.5126)		GRIKRNWQK
(37: 1.4947)		IHPERTVAL
(294: 2.2073)
9SARARTLSL
(9: 1.8057)		YPRIKLLVI
(69: 2.0337)		ARARTLSLY
(10: 1.2183)		YEAAQGVLL
(170: 1.5760)
10QPTTFKNPI
(80: 1.1417)		RMHLIGTAV
(33: 1.4672)		KQWTRRMHL
(28: 1.5430)		HKEFYIYYL
(15: 1.4474)
11TPRTTTEPL
(274: 1.7685)		MSKARSLQL
(181: 1.3726)		RRLVLAATL
(6: 1.9702)		QRTNTLAVL
(42: 1.4593)
12MPYLRGVSL
(300: 1.8440)		MPYLRGVSL
(300: 2.1953)		RRLVLAATL
(6: 1.9702)		YRHVMIREL
(104: 1.7846)
13MPRLRLVGL
(493: 1.7353)		MPRLRLVGL
(493: 2.2824)		RRLVLAATL
(6: 1.9702)		TAAQRTHTL
(39: 1.5626)
14MPAPPLNPF
(414: 1.6955)		KEKERHKAV
(94: 1.8613)		RRLMPAPPL
(411: 1.7237)		YESNTVSAL
(317: 2.1937)
15TPRIPLDSL
(187: 1.5747)		SSHRKHKAM
(162: 1.6542)		RRMRAGSSH
(250: 1.6225)		AHAPQNAAL
(138: 2.5007)
16MPRKRGRPL
(237: 1.8778)		MPRKRGRPL
(237: 2.3735)		RRTLQAQQL
(546: 1.5424)		DHAQGVAAL
(877: 2.1234)
17VPHHPGGDV
(134: 0.9985)		YVEEFYQAA
(86: 0.7269)		KRVMAPSDR
(37: 1.1717)		FHDPSTVRL
(159: 2.8191)
18HPSGAAVAI
(409: 1.4883)		RLYVEDMVL
(284: 1.2511)		RRAEKEKAK
(215: 1.7438)		NHSAHTEVL
(147: 2.1507)
19KPSAVMTAF
(919: 1.8285)		EPSRRTVQF
(667: 1.7157)		RRWAAQNTF
(77: 2.1177)		FRVDGADAL
(675: 2.1322)
20AARQRIMTM
(156: 1.6084)		ILMWSFAAL
(204: 1.7177)		RRAPTGLYE
(71: 0.9324)		QLDDNWWIL
(197: 1.3196)
21APAAPHSPL
(153: 1.7675)		ELRRRGQEV
(1113: 1.9415)		RRLLAASPF
(877: 2.0769)		NQATTSLAL
(504: 1.9553)
22YPAHRSKIV
(163: 1.5878)		DAQVRQTAL
(281: 1.8406)		QRRDVVIGM
(75: 1.3697)		SHLVSVDKL
(331: 1.5360)
23TPRVGCSVA
(63: 1.2802)		FFRRYTRVF
(46: 2.1834)		RRYTRVFPA
(48: 1.7379)		YFTLPTAVL
(16: 1.6593)
24SPLSVSAVF
(27: 1.5060)		YMQYRLTPF
(111: 2.0206)		FRYDHINSY
(61: 1.7109)		YASQKFVQL
(311: 1.2960)
25RPRLFARAI
(256: 1.7812)		RLPRRLQAM
(301: 2.1397)		RRLLVHAGI
(483: 1.8779)		HSEAATSSL
(72: 1.7315)
(b)
AntigensB44B58B62
1RELQSVYLL
(1293: 1.9593)		GTFAAPLRW
(952: 2.0156)		SQQETSSLY
(802: 1.4851)
2VESGALFSF
(276: 1.5005)		VSGGSTVSF
(299: 1.2478)		LVVDASSLF
(232: 1.2364)
3AECDTGYSL
(383: 1.7888)		SAAAPYSLW
(481: 1.7104)		VINSAAAPY
(478: 1.2841)
4AECDTGYSL
(588: 1.7888)		SAAAPYSLW
(686: 1.7104)		AMKDPYTNY
(355: 1.5075)
5PEQSKNAAL
(153: 0.9583)		AMASDASSW
(20: 1.2946)		SGYMPTASF
(141: 1.1587)
6CESGYALTV
(233: 1.5835)		VAATVACVM
(269: 1.3253)		SGYALTVSY
(235: 1.2956)
7HEANVFGDL
(217: 1.4597)		ITLASHPHY
(207: 1.8535)		MQVLLGADF
(237: 1.4107)
8EEHKFHEQL
(234: 1.7745)		STQPPVSSW
(375: 1.3179)		QFIQGRCPY
(279: 1.2654)
9YEAAQGVLL
(170: 1.8058)		QSFAALQSW
(186: 1.9574)		REHGCAAYY
(301: 1.0743)
10KEFYIYYLA
(16: 1.2817)		TAVGVAICW
(62: 1.8196)		RMHLIGTAV
(33: 1.0529)
11PEWGSMTSL
(152: 1.5995)		ISGSVPPEW
(146: 1.9830)		YVSGISPTY
(83: 1.4703)
12LEGLTSLTL
(131: 1.7189)		ITGPLPPQW
(241: 1.9075)		YVRVISTTY
(83: 1.4798)
13SEMKSLTSL
(323: 1.9322)		GSLPSEWSW
(171: 1.9009)		TQVSGTLPL
(336: 1.2966)
14GEFSDIRQL
(25: 1.9010)		AAVADAEVW
(458: 1.6950)		QVKELKVSY
(182: 1.3565)
15AQTRVHPGL
(115: 0.9806)		MSLFVSTLF
(381: 1.5159)		FVSTLFGAF
(384: 1.2037)
16GEARNPHRL
(724: 1.7322)		AASAPSFQW
(501: 1.9979)		RLAAEAQGF
(516: 1.3449)
17EFYQAAGHL
(89: 0.5235)		KADTYVEEF
(82: 1.5709)		QDMATVFAY
(150: 1.1423)
18GEDEEQVSL
(71: 1.8499)		SAAKAQVSY
(196: 1.3995)		IVSGLVESY
(299: 1.3837)
19AEHRRGTQL
(978: 1.4654)		CASTATHVF
(601: 1.7234)		MMSQSLSTY
(1: 1.4755)
20AEMQRNIDR
(60: 0.5443)		LMWSFAALF
(205: 1.0739)		RGYTRGIPY
(33: 1.3338)
21TESVQFLKL
(968: 1.5363)		LTSAINQFW
(140: 1.8100)		SMMLPAGDF
(797: 1.4153)
22FEAPLGEML
(132: 1.6939)		VAFACYFLF
(26: 1.6804)		VLFTDGTPY
(57: 1.4757)
23QEAKARTTV
(193: 1.3216)		TGSSPSVYF
(9: 1.0291)		AMHDDQLRF
(38: 1.2996)
24KEPGHKIPL
(256: 1.9127)		LTAPVYMQY
(106: 1.7822)		SQSLTAPVY
(103: 1.4574)
25REWYSADVL
(525: 1.8122)		KSSALAHKL
(246: 1.5564)		RVVKQSLCF
(128: 1.1964)